Difference between revisions of "DNA for Information Storage (Microbes as Machines)"

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(Assigned Papers)
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[[File:empty.png|thumb|300px|right|<cite></cite>.]]  
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[[File:Goldman_DNA_Storage_Costs.png|thumb|300px|right|Analysis of when it's economical in terms of timescale and amount of information to use DNA storage <cite>Goldman2013</cite>.]]  
  
==== [[Media:Spring2015_DNA_Information_Storage_Pre-Discussion_Questions.pdf|Download Pre-Discussion Questions (PDF)]] ====
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==== [[Media:Spring2015_DNA_for_Information_Storage_Pre-Discussion.pdf|Download Pre-Discussion Questions (PDF)]] ====
  
 
<blockquote>
 
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...DNA storage is very dense. At theoretical maximum, DNA can encode two bits per nucleotide (nt) or 455 exabytes per gram of single-stranded DNA. <cite>Church2012</cite>
 
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<biblio>
 
<biblio>
#Goldman2013 pmid=23354052
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#Church2012 pmid=22903519
#Yong2013 [http://phenomena.nationalgeographic.com/2013/01/23/shakespeares-sonnets-and-mlks-speech-stored-in-dna-speck/ Shakespeare’s Sonnets and MLK’s Speech Stored in DNA Speck]
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// George Church encodes his book [http://www.amazon.com/Regenesis-Synthetic-Biology-Reinvent-Ourselves/dp/0465075703/ref=sr_1_1?ie=UTF8&qid=1427557224&sr=8-1&keywords=regenesis] in DNA. See the [supplement] for lists of previous biological information storage.
#Marantz2014 [http://www.newyorker.com/magazine/2014/11/24/petri-dish-pop Petri-Dish Pop]
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#Sennels2012 pmid=23104084
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// Commentary on above paper.
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#Marantz2014 Marantz, A. [http://www.newyorker.com/magazine/2014/11/24/petri-dish-pop Petri-Dish Pop] ''The New Yorker'' Nov. 24, 2014.
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// Most copies of an album ever sold in a few drops of liquid?
 
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<biblio>
 
<biblio>
#Church2012 pmid=22903519
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#Goldman2013 pmid=23354052
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// More detailed treatment of costs/benefits of DNA storage by EBI and CERN teams. Commentary article by Ed Yong: [http://phenomena.nationalgeographic.com/2013/01/23/shakespeares-sonnets-and-mlks-speech-stored-in-dna-speck/ Shakespeare’s Sonnets and MLK’s Speech Stored in DNA Speck]
 
#Grass2015 pmid=25650567
 
#Grass2015 pmid=25650567
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// Addition of storage in silica to stabilize DNA. Press release by ETH Zurich: [https://www.ethz.ch/en/news-and-events/eth-news/news/2015/02/data-storage-for-eternity.html Data-storage for eternity]
 
</biblio>
 
</biblio>

Latest revision as of 14:04, 6 April 2015

Analysis of when it's economical in terms of timescale and amount of information to use DNA storage [1].

Download Pre-Discussion Questions (PDF)

...DNA storage is very dense. At theoretical maximum, DNA can encode two bits per nucleotide (nt) or 455 exabytes per gram of single-stranded DNA. [2]

Required Reading/Viewing

Error fetching PMID 22903519:
Error fetching PMID 23104084:
  1. Error fetching PMID 22903519: [Church2012]
    George Church encodes his book [1] in DNA. See the [supplement] for lists of previous biological information storage.
  2. Error fetching PMID 23104084: [Sennels2012]
    Commentary on above paper.
  3. Marantz, A. Petri-Dish Pop The New Yorker Nov. 24, 2014. [Marantz2014]
    Most copies of an album ever sold in a few drops of liquid?
All Medline abstracts: PubMed | HubMed

Assigned Papers

Error fetching PMID 23354052:
Error fetching PMID 25650567:
  1. Error fetching PMID 23354052: [Goldman2013]
    More detailed treatment of costs/benefits of DNA storage by EBI and CERN teams. Commentary article by Ed Yong: Shakespeare’s Sonnets and MLK’s Speech Stored in DNA Speck
  2. Error fetching PMID 25650567: [Grass2015]
    Addition of storage in silica to stabilize DNA. Press release by ETH Zurich: Data-storage for eternity
All Medline abstracts: PubMed | HubMed